Exploratory analysis on DPCoA on small data sets with missing values using imputation methods / (Record no. 2477)

MARC details
000 -LEADER
fixed length control field 02768nam a22002893a 4500
001 - CONTROL NUMBER
control field UPMIN-00004810113
003 - CONTROL NUMBER IDENTIFIER
control field UPMIN
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20230201171258.0
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 230201b |||||||| |||| 00| 0 eng d
040 ## - CATALOGING SOURCE
Original cataloging agency DCL
Transcribing agency UPMin
Modifying agency upmin
041 ## - LANGUAGE CODE
Language code of text/sound track or separate title eng
090 #0 - LOCALLY ASSIGNED LC-TYPE CALL NUMBER (OCLC); LOCAL CALL NUMBER (RLIN)
Classification number (OCLC) (R) ; Classification number, CALL (RLIN) (NR) LG993.5 2010
Local cutter number (OCLC) ; Book number/undivided call number, CALL (RLIN) A64 M35
100 ## - MAIN ENTRY--PERSONAL NAME
Personal name Mahinay, Kristine Karen C.
9 (RLIN) 2025
245 ## - TITLE STATEMENT
Title Exploratory analysis on DPCoA on small data sets with missing values using imputation methods /
Statement of responsibility, etc. Kristine Karen C. Mahinay
260 ## - PUBLICATION, DISTRIBUTION, ETC.
Date of publication, distribution, etc. 2010
300 ## - PHYSICAL DESCRIPTION
Extent 64 leaves.
502 ## - DISSERTATION NOTE
Dissertation note Thesis (BS Applied Mathematics) -- University of the Philippines Mindanao, 2010
520 3# - SUMMARY, ETC.
Summary, etc. A new ordination method, DPCoA, allows comparison among several communities containing species that differ in taxonomic features. However, missing information in a data set are inevitable, and DPCoA does not have an internal method that can handle missing value in a data set. As an introductory and exploratory analysis, the study determined how the commonly used imputation methods, namely, mean imputation, k-nearest neighbor imputation, regression imputation, and expectation-maximization imputation, used as pre-processing step to DPCoA for incomplete abundance data sets affect the quadratic entropy and DPCoA plots of the sites studied. Also, different levels of degradation -1%, 5% and 15% - were investigated as to how well these imputation approaches behave when high amount of missing values are present in the data set. Rao DIVCs generated and DPCoA plots obtained from the complete data and the imputed data sets were compared using Spearman rank correlation and Procrustes analysis, respectively. Results showed that the imputation methods employed yield high Spearman correlation coefficients and correlation of Procrustes rotation when missing values are relatively small as they estimate close to the real value that was lost. Consequently, as greater amounts of missing values exist, a weaker performance of the imputation methods, especially that of the expectation-maximization imputation, cold be obtained. Although it is expected that expectation-maximization imputation yield good estimates, a lower Spearman coefficient and correlation of Procrustes rotation were computed. This would lead to higher risk of misinterpretation in the relationships of several communities. However, since this study is time-bound, it is suggested that this study be repeated several times to further evaluate the performance of the imputation methods.
650 17 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name entry element Double principal coordinate analysis
9 (RLIN) 821
650 17 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name entry element Imputation
9 (RLIN) 2026
650 17 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name entry element Missing values
9 (RLIN) 990
650 17 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name entry element Rao diversity coefficient
9 (RLIN) 1926
658 ## - INDEX TERM--CURRICULUM OBJECTIVE
Main curriculum objective Undergraduate Thesis
Curriculum code AMAT200
905 ## - LOCAL DATA ELEMENT E, LDE (RLIN)
a Fi
905 ## - LOCAL DATA ELEMENT E, LDE (RLIN)
a UP
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Source of classification or shelving scheme Library of Congress Classification
Koha item type Thesis
Holdings
Withdrawn status Lost status Source of classification or shelving scheme Damaged status Status Collection Home library Current library Shelving location Date acquired Source of acquisition Accession Number Total Checkouts Full call number Barcode Date last seen Price effective from
    Library of Congress Classification   Not For Loan Preservation Copy University Library University Library Archives and Records 2010-07-06 donation UAR-T-gd1576   LG993.5 2010 A64 M35 3UPML00033348 2022-10-05 2022-10-05
    Library of Congress Classification   Not For Loan Room-Use Only College of Science and Mathematics University Library Theses 2010-05-13 donation CSM-T-gd2249   LG993.5 2010 A64 M35 3UPML00012583 2022-10-05  
 
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