RAPD analysis for the detection of genetic variation in sago (Metroxylon sagu rottb.) from selected areas in Mindanao and Cebu / Corissa Mindy T. Guerrero

By: Material type: TextTextLanguage: English Publication details: 2008Description: 42 leavesSubject(s): Dissertation note: Thesis (BS Biology) -- University of the Philippines Mindanao, 2005 Summary: Random amplified polymorphic DNA (RAPD) analysis was used to determine the banding of different samples of sago in selected areas of Mindanao and Cebu and to find if there is a difference between spiny and spineless sago species at the molecular level. The study was carried out using 5 different RAPD primers on 11 sago samples. Of these samples, 4 were spineless sago palms while the rest were spiny. For each sample, 5 replicates were amplified to verify that samples in an area are one and the same. However, sago samples from Monkayo had only 4 replicates while Langtad and Malinglingon had 4 and 3 replicates, respectively. In total, 51 samples were amplified per primer. A total of 248 bands were scored from all the primers. The banding patterns were similar in sago sampled from the same location even if these have different morphological characteristics. The result suggests that both spiny and spineless sago palms should be named as Metroxylon sagu. A cluster analysis using the neighbor-joining. UPGMA and parsimony methods were conducted based on the RAPD data. UPGMA and parsimony methods generated similar and more precise dendogram. From the dendograms, three groups were evident. The first group includes samples from Monkayo, Compostela Valley and Agusan del Sur, the second cluster composed of samples from Davao City and Davao del Sur and the third cluster is composed of samples from Cebu. Morphological characteristics did not have an effect on the banding patterns of sago. The genetic distance of sago palm population was related to the geographical distance
Tags from this library: No tags from this library for this title. Log in to add tags.
Star ratings
    Average rating: 0.0 (0 votes)
Holdings
Item type Current library Collection Call number Status Date due Barcode
Thesis University Library Regular Circulation LG993.5 2005 B4 G83 (Browse shelf(Opens below)) Available 3UPML00022058
Thesis University Library Reference/Room-Use Only LG993.5 2005 B4 G83 (Browse shelf(Opens below)) Available 3UPML00011346

Thesis (BS Biology) -- University of the Philippines Mindanao, 2005

Random amplified polymorphic DNA (RAPD) analysis was used to determine the banding of different samples of sago in selected areas of Mindanao and Cebu and to find if there is a difference between spiny and spineless sago species at the molecular level. The study was carried out using 5 different RAPD primers on 11 sago samples. Of these samples, 4 were spineless sago palms while the rest were spiny. For each sample, 5 replicates were amplified to verify that samples in an area are one and the same. However, sago samples from Monkayo had only 4 replicates while Langtad and Malinglingon had 4 and 3 replicates, respectively. In total, 51 samples were amplified per primer. A total of 248 bands were scored from all the primers. The banding patterns were similar in sago sampled from the same location even if these have different morphological characteristics. The result suggests that both spiny and spineless sago palms should be named as Metroxylon sagu. A cluster analysis using the neighbor-joining. UPGMA and parsimony methods were conducted based on the RAPD data. UPGMA and parsimony methods generated similar and more precise dendogram. From the dendograms, three groups were evident. The first group includes samples from Monkayo, Compostela Valley and Agusan del Sur, the second cluster composed of samples from Davao City and Davao del Sur and the third cluster is composed of samples from Cebu. Morphological characteristics did not have an effect on the banding patterns of sago. The genetic distance of sago palm population was related to the geographical distance

There are no comments on this title.

to post a comment.
 
University of the Philippines Mindanao
The University Library, UP Mindanao, Mintal, Tugbok District, Davao City, Philippines
Email: library.upmindanao@up.edu.ph
Contact: (082)295-7025
Copyright @ 2022 | All Rights Reserved